roseTable csv parser. updated rose.cpp for benchmarking
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parent
55e96e7420
commit
58e0466339
3 changed files with 290 additions and 57 deletions
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@ -26,7 +26,7 @@ typedef int32_t val_t; // XXX needed by lsmWorkers..
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decompressing the data actually matches the original dataset.
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*/
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#define CHECK_OUTPUT
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//#define CHECK_OUTPUT
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using rose::Pstar;
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using rose::Multicolumn;
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@ -59,12 +59,20 @@ namespace rose {
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typename PAGELAYOUT::FMT::TUP s;
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long INSERTS;
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int file_mode = 0;
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char * file = 0;
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if(argc == 2) {
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INSERTS = atoll(argv[1]);
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} else if (argc == 3) {
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file_mode = 1;
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assert(!strcmp("-f", argv[1]));
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file = argv[2];
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} else {
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INSERTS = 10 * 1000 * 1000;
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}
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static const long COUNT = INSERTS / 100;
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int column[] = { 0 , 1, 2, 3, 4, 5, 6, 7, 8, 9 };
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static long COUNT = INSERTS / 100;
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long int count = COUNT;
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struct timeval start_tv, now_tv;
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@ -74,67 +82,292 @@ namespace rose {
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start = rose::tv_to_double(start_tv);
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last_start = start;
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printf("tuple 'size'%d ; %ld\n", PAGELAYOUT::FMT::TUP::sizeofBytes(), sizeof(typename PAGELAYOUT::FMT::TUP));
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for(long int i = 0; i < INSERTS; i++) {
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getTuple<PAGELAYOUT>(i,t);
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TlsmTableInsert(h,t);
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// getTuple<PAGELAYOUT>(i,t);
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// assert(TlsmTableFind(xid,h,t,s));
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count --;
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if(!count) {
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count = COUNT;
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gettimeofday(&now_tv,0);
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now = tv_to_double(now_tv);
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printf("%3ld%% write "
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"%9.3f Mtup/sec (avg) %9.3f Mtup/sec (cur) "
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"%9.3f Mbyte/sec (avg) %9.3f Mbyte/sec (cur)\n",
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((i+1) * 100) / INSERTS,
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((double)i/1000000.0)/(now-start),
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((double)count/1000000.0)/(now-last_start),
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(((double)PAGELAYOUT::FMT::TUP::sizeofBytes())*(double)i/1000000.0)/(now-start),
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(((double)PAGELAYOUT::FMT::TUP::sizeofBytes())*(double)count/1000000.0)/(now-last_start)
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);
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last_start = now;
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if(file_mode) {
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typename PAGELAYOUT::FMT::TUP scratch;
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int max_col_number = 0;
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for(int col =0; col < PAGELAYOUT::FMT::TUP::NN ; col++) {
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max_col_number = max_col_number < column[col]
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? column[col] : max_col_number;
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}
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char ** toks = (char**)malloc(sizeof(char*)*(max_col_number+1));
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printf("Reading from file %s\n", file);
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int inserts = 0;
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size_t line_len = 100;
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// getline wants malloced memmory (it probably calls realloc...)
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char * line = (char*) malloc(sizeof(char) * line_len);
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FILE * input = fopen(file, "r");
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if(!input) {
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perror("Couldn't open input");
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return 1;
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}
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size_t read_len;
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COUNT = 1000000;
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count = 1000000;
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while(-1 != (read_len = getline(&line, &line_len, input))) {
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int line_tok_count;
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{
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char * saveptr;
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int i;
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toks[0] = strtok_r(line, ",\n", &saveptr);
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for(i = 1; i < (max_col_number+1); i++) {
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toks[i] = strtok_r(0, ",\n", &saveptr);
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if(!toks[i]) {
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break;
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}
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}
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line_tok_count = i;
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}
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if(line_tok_count < (max_col_number+1)) {
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// printf("!");
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if(-1 == getline(&line,&line_len,input)) {
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// hit eof.
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} else {
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printf("Not enough tokesn on line %d (found: %d expected: %d\n",
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inserts+1, line_tok_count, max_col_number+1);
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return 1;
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}
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} else {
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// printf(".");
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inserts ++;
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if(0 < PAGELAYOUT::FMT::TUP::NN) {
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char * endptr;
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errno = 0;
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typename PAGELAYOUT::FMT::TUP::TYP0 t = strtoll(toks[column[0]], &endptr, 0);
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if(strlen(toks[column[0]]) - (size_t)(endptr-toks[column[0]]) > 1) {
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printf("couldnt parse token #%d: ->%s<-\n", column[0], toks[column[0]]);
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return 1;
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}
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if(errno) {
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printf("Couldn't parse token #%d: ->%s<-", column[0],toks[column[0]]);
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perror("strtoll error is");
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return 1;
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}
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scratch.set0(&t);
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}
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if(1 < PAGELAYOUT::FMT::TUP::NN) {
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char * endptr;
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errno = 0;
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typename PAGELAYOUT::FMT::TUP::TYP1 t = strtoll(toks[column[1]], &endptr, 0);
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if(strlen(toks[column[1]]) - (size_t)(endptr-toks[column[1]]) > 1) {
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printf("couldnt parse token #%d: ->%s<-\n", column[1], toks[column[1]]);
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return 1;
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}
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if(errno) {
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printf("Couldn't parse token #%d: ->%s<-", column[1],toks[column[1]]);
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perror("strtoll error is");
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return 1;
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}
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scratch.set1(&t);
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}
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if(2 < PAGELAYOUT::FMT::TUP::NN) {
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char * endptr;
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errno = 0;
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typename PAGELAYOUT::FMT::TUP::TYP2 t = strtoll(toks[column[2]], &endptr, 0);
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if(strlen(toks[column[2]]) - (size_t)(endptr-toks[column[2]]) > 1) {
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printf("couldnt parse token #%d: ->%s<-\n", column[2], toks[column[2]]);
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return 1;
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}
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if(errno) {
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printf("Couldn't parse token #%d: ->%s<-", column[2],toks[column[2]]);
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perror("strtoll error is");
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return 1;
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}
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scratch.set2(&t);
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}
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if(3 < PAGELAYOUT::FMT::TUP::NN) {
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char * endptr;
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errno = 0;
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typename PAGELAYOUT::FMT::TUP::TYP3 t = strtoll(toks[column[3]], &endptr, 0);
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if(strlen(toks[column[3]]) - (size_t)(endptr-toks[column[3]]) > 1) {
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printf("couldnt parse token #%d: ->%s<-\n", column[3], toks[column[3]]);
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return 1;
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}
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if(errno) {
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printf("Couldn't parse token #%d: ->%s<-", column[3],toks[column[3]]);
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perror("strtoll error is");
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return 1;
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}
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scratch.set3(&t);
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}
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if(4 < PAGELAYOUT::FMT::TUP::NN) {
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char * endptr;
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errno = 0;
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typename PAGELAYOUT::FMT::TUP::TYP4 t = strtoll(toks[column[4]], &endptr, 0);
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if(strlen(toks[column[4]]) - (size_t)(endptr-toks[column[4]]) > 1) {
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printf("couldnt parse token #%d: ->%s<-\n", column[4], toks[column[4]]);
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return 1;
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}
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if(errno) {
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printf("Couldn't parse token #%d: ->%s<-", column[4],toks[column[4]]);
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perror("strtoll error is");
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return 1;
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}
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scratch.set4(&t);
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}
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if(5 < PAGELAYOUT::FMT::TUP::NN) {
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char * endptr;
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errno = 0;
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typename PAGELAYOUT::FMT::TUP::TYP5 t = strtoll(toks[column[5]], &endptr, 0);
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if(strlen(toks[column[5]]) - (size_t)(endptr-toks[column[5]]) > 1) {
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printf("couldnt parse token #%d: ->%s<-\n", column[5], toks[column[5]]);
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return 1;
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}
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if(errno) {
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printf("Couldn't parse token #%d: ->%s<-", column[5],toks[column[5]]);
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perror("strtoll error is");
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return 1;
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}
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scratch.set5(&t);
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}
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if(6 < PAGELAYOUT::FMT::TUP::NN) {
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char * endptr;
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errno = 0;
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typename PAGELAYOUT::FMT::TUP::TYP6 t = strtoll(toks[column[6]], &endptr, 0);
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if(strlen(toks[column[6]]) - (size_t)(endptr-toks[column[6]]) > 1) {
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printf("couldnt parse token #%d: ->%s<-\n", column[6], toks[column[6]]);
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return 1;
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}
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if(errno) {
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printf("Couldn't parse token #%d: ->%s<-", column[6],toks[column[6]]);
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perror("strtoll error is");
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return 1;
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}
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scratch.set6(&t);
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}
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if(7 < PAGELAYOUT::FMT::TUP::NN) {
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char * endptr;
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errno = 0;
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typename PAGELAYOUT::FMT::TUP::TYP7 t = strtoll(toks[column[7]], &endptr, 0);
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if(strlen(toks[column[7]]) - (size_t)(endptr-toks[column[7]]) > 1) {
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printf("couldnt parse token #%d: ->%s<-\n", column[7], toks[column[7]]);
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return 1;
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}
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if(errno) {
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printf("Couldn't parse token #%d: ->%s<-", column[7],toks[column[7]]);
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perror("strtoll error is");
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return 1;
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}
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scratch.set7(&t);
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}
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if(8 < PAGELAYOUT::FMT::TUP::NN) {
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char * endptr;
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errno = 0;
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typename PAGELAYOUT::FMT::TUP::TYP8 t = strtoll(toks[column[8]], &endptr, 0);
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if(strlen(toks[column[8]]) - (size_t)(endptr-toks[column[8]]) > 1) {
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printf("couldnt parse token #%d: ->%s<-\n", column[8], toks[column[8]]);
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return 1;
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}
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if(errno) {
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printf("Couldn't parse token #%d: ->%s<-", column[8],toks[column[8]]);
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perror("strtoll error is");
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return 1;
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}
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scratch.set8(&t);
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}
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if(9 < PAGELAYOUT::FMT::TUP::NN) {
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char * endptr;
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errno = 0;
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typename PAGELAYOUT::FMT::TUP::TYP9 t = strtoll(toks[column[9]], &endptr, 0);
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if(strlen(toks[column[9]]) - (size_t)(endptr-toks[column[9]]) > 1) {
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printf("couldnt parse token #%d: ->%s<-\n", column[9], toks[column[9]]);
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return 1;
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}
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if(errno) {
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printf("Couldn't parse token #%d: ->%s<-", column[9],toks[column[9]]);
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perror("strtoll error is");
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return 1;
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}
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scratch.set9(&t);
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}
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// abort();
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TlsmTableInsert(h,scratch);
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count --;
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if(!count) {
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count = COUNT;
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gettimeofday(&now_tv,0);
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now = tv_to_double(now_tv);
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printf("Wrote %d tuples "
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"%9.3f Mtup/sec (avg) %9.3f Mtup/sec (cur) "
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"%9.3f Mbyte/sec (avg) %9.3f Mbyte/sec (cur)\n",
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inserts, //((inserts+1) * 100) / INSERTS,
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((double)inserts/1000000.0)/(now-start),
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((double)count/1000000.0)/(now-last_start),
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(((double)PAGELAYOUT::FMT::TUP::sizeofBytes())*(double)inserts/1000000.0)/(now-start),
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(((double)PAGELAYOUT::FMT::TUP::sizeofBytes())*(double)count/1000000.0)/(now-last_start)
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);
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last_start = now;
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}
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}
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}
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printf("insertions done.\n");
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} else {
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for(long int i = 0; i < INSERTS; i++) {
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getTuple<PAGELAYOUT>(i,t);
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TlsmTableInsert(h,t);
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// getTuple<PAGELAYOUT>(i,t);
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// assert(TlsmTableFind(xid,h,t,s));
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count --;
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if(!count) {
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count = COUNT;
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gettimeofday(&now_tv,0);
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now = tv_to_double(now_tv);
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printf("%3ld%% write "
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"%9.3f Mtup/sec (avg) %9.3f Mtup/sec (cur) "
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"%9.3f Mbyte/sec (avg) %9.3f Mbyte/sec (cur)\n",
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((i+1) * 100) / INSERTS,
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((double)i/1000000.0)/(now-start),
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((double)count/1000000.0)/(now-last_start),
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(((double)PAGELAYOUT::FMT::TUP::sizeofBytes())*(double)i/1000000.0)/(now-start),
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(((double)PAGELAYOUT::FMT::TUP::sizeofBytes())*(double)count/1000000.0)/(now-last_start)
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);
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last_start = now;
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}
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#ifdef LEAK_TEST
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if(i == INSERTS-1) {
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printf("Running leak test; restarting from zero.\n");
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i = 0;
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}
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if(i == INSERTS-1) {
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printf("Running leak test; restarting from zero.\n");
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i = 0;
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}
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#endif
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}
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printf("insertions done.\n"); fflush(stdout);
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count = COUNT;
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gettimeofday(&start_tv,0);
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start = rose::tv_to_double(start_tv);
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last_start = start;
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for(long int i = 0; i < INSERTS; i++) {
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getTuple<PAGELAYOUT>(i,t);
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typename PAGELAYOUT::FMT::TUP const * const sp = TlsmTableFind(xid,h,t,s);
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assert(sp);
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assert(*sp == s);
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count--;
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if(!count) {
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count = COUNT;
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gettimeofday(&now_tv,0);
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now = tv_to_double(now_tv);
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printf("%3ld%% read "
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"%9.3f Mtup/sec (avg) %9.3f Mtup/sec (cur) "
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"%9.3f Mbyte/sec (avg) %9.3f Mbyte/sec (cur)\n",
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((i+1) * 100) / INSERTS,
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((double)i/1000000.0)/(now-start),
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((double)count/1000000.0)/(now-last_start),
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(((double)PAGELAYOUT::FMT::TUP::sizeofBytes())*(double)i/1000000.0)/(now-start),
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(((double)PAGELAYOUT::FMT::TUP::sizeofBytes())*(double)count/1000000.0)/(now-last_start)
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);
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last_start = now;
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}
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printf("insertions done.\n"); fflush(stdout);
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count = COUNT;
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gettimeofday(&start_tv,0);
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start = rose::tv_to_double(start_tv);
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last_start = start;
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for(long int i = 0; i < INSERTS; i++) {
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getTuple<PAGELAYOUT>(i,t);
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typename PAGELAYOUT::FMT::TUP const * const sp = TlsmTableFind(xid,h,t,s);
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assert(sp);
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assert(*sp == s);
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count--;
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if(!count) {
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count = COUNT;
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gettimeofday(&now_tv,0);
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now = tv_to_double(now_tv);
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printf("%3ld%% read "
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"%9.3f Mtup/sec (avg) %9.3f Mtup/sec (cur) "
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"%9.3f Mbyte/sec (avg) %9.3f Mbyte/sec (cur)\n",
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((i+1) * 100) / INSERTS,
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((double)i/1000000.0)/(now-start),
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((double)count/1000000.0)/(now-last_start),
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(((double)PAGELAYOUT::FMT::TUP::sizeofBytes())*(double)i/1000000.0)/(now-start),
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(((double)PAGELAYOUT::FMT::TUP::sizeofBytes())*(double)count/1000000.0)/(now-last_start)
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);
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last_start = now;
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}
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}
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}
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TlsmTableStop<PAGELAYOUT>(h);
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@ -11,7 +11,7 @@ namespace rose {
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static const char NORMAL = 0;
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static const char TOMBSTONE = 1;
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static const int TUPLE_ID = 1;
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static const int NN = N;
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typedef TYPE0 TYP0;
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typedef TYPE1 TYP1;
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typedef TYPE2 TYP2;
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